Daniel Wilson's Blog

Research in Population Genomics

Friday, 9 October 2015

PLoS Biology: Staphylococcus aureus invading the blood are less toxic

›
Toxicity in nose, blood and skin bacteria . Collaborative work with Ruth Massey's group at the University of Bath taking forward a ...
2 comments:
Tuesday, 8 September 2015

New paper: Rapid host switching in Campylobacter

›
Our new open access paper Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections was publi...
2 comments:
Monday, 17 August 2015

BASTA: Improved method for phylogeography

›
This week sees publication of our paper New Routes to Phylogeography: a Bayesian Structured Coalescent Approximation in PLoS Genetics . P...
Friday, 24 July 2015

New Journal: Microbial Genomics

›
This week sees the launch of Microbial Genomics , a new open access journal from the Society for General Microbiology . Here's an ex...
1 comment:
Tuesday, 21 July 2015

Resistance is Futile: Science Museum Lates and Cheltenham Science Festival

›
Some photos from this summer's Science Museum Lates event with the Royal Society and the Cheltenham Science Festival . Thanks to every...
Wednesday, 8 April 2015

World Health Day: Food-borne disease theme

›
For World Health Day 2015, the group's research into food-borne campylobacter infection was featured on the Nuffield Department of Medi...
1 comment:
Tuesday, 31 March 2015

ClonalFrameML: accounting for recombination in bacterial phylogenies

›
Horizontal gene transfer in bacteria, mediated by transformation, transduction or conjugation, can result in gain, loss and replacement of...
2 comments:
Friday, 28 November 2014

New paper: bacterial phylogenetic inference is robust to recombination but demographic inference is not

›
Published this week in mBio , Jessica Hedge's new paper " Bacterial phylogenetic inference is robust to recombination but demograph...
1 comment:
Friday, 6 June 2014

Cheltenham Science Festival

›
Earlier this week members of the group represented the Nuffield Department of Medicine at the Cheltenham Science Festival with our Mod...
3 comments:

New paper: Mobile elements drive recombination hotspots in the core genome of Staphylococcus aureus

›
This week published in Nature Communications we have a new open access paper looking at what drives variability in rates of recombination...
Tuesday, 1 October 2013

The role of hospital transmission in Clostridium difficile infection

›
This week the Modernising Medical Microbiology consortium at Oxford published the findings of a six-year study into the transmission of the...
1 comment:
Friday, 20 September 2013

Postdoctoral Position in Statistical Genomics

›
The position of Postdoctoral Scientist is available in my group to lead research on the Wellcome Trust and Royal Society funded project Sta...
3 comments:
Tuesday, 17 September 2013

Sir Henry Dale Fellowship

›
I am pleased to report that I have been awarded a Wellcome Trust and Royal Society funded Sir Henry Dale Fellowship. The subject of the ...
1 comment:
Thursday, 6 June 2013

Detecting mixed strain infections with whole genome sequencing

›
Whole genome sequencing in near-to-real time is set to become a routine tool for outbreak detection by hospital and public health microbiolo...
1 comment:
Wednesday, 22 May 2013

Within-host evolution of Staphylococcus aureus during asymptomatic carriage

›
Given its notoriety as one of the world's major causes of infection-related deaths, it may come as a surprise that one in three health...
Monday, 4 February 2013

Coalescent inference for infectious disease

›
Today my student Bethany Dearlove has her first paper published, called Coalescent inference for infectious disease: meta-analysis of he...
Thursday, 15 November 2012

Postdoctoral Positions in Pathogen Genomics

›
These positions are now closed. There are currently seven posts advertised to join the Pathogen Genomics group at the Nuffield Department o...
Monday, 5 November 2012

James Martin Fellowship

›
This position is now closed. A prestigious James Martin Fellowship funded by the Oxford Martin School is available in my research group fo...
Friday, 7 September 2012

PLoS Pathogens Review Published!

›
Published today in PLoS Pathogens :
Thursday, 16 August 2012

gammaMap available for download

›
The software gammaMap - which implements the analyses developed in Wilson, Hernandez, Andolfatto and Przeworski (2011) PLoS Genetics 7 : ...
Monday, 13 August 2012

Nature Reviews Genetics: Transforming Clinical Microbiology

›
My colleagues Xavier Didelot , Rory Bowden , Tim Peto , Derrick Crook and I have just published a review online ahead of print in Nature R...
Friday, 20 July 2012

Post-doc Positions in Pathogen Genomics

›
Post-doc positions in Pathogen Genomics are available in my group and Derrick Crook's lab. We will be hiring people to work on pathogen ...
2 comments:
Monday, 5 March 2012

PNAS paper on staphylococcal evolution during infection

›
Today in PNAS Early Edition my colleagues and I have a paper published reporting the genome evolution of Staphylococcus aureus during the ...
Wednesday, 11 January 2012

SMBE 2012: Microbial Genome Evolution Symposium

›
Along with my colleagues Xavier Didelot , Ed Feil , Eduardo Rocha and Howard Ochman , I will be organizing a symposium on Microbial Genome ...
Friday, 2 December 2011

New method inferring natural selection published today

›
I am pleased to report that my new paper "A population genetics-phylogenetics approach to inferring natural selection" is publishe...
Saturday, 1 January 2011

Group Member Profiles Updated

›
Richard Everitt and Bethany Dearlove, postdoctoral scientist and D.Phil. student in my lab have posted their profiles and research interest...
Friday, 1 October 2010

Geographical differences in transmission revealed by cryptic population structure

›
Two papers that I co-authored with colleagues at Lancaster and Massey Universities appear this month in the October 2010 issue of Epidemiolo...
Saturday, 18 September 2010

Evolutionary Genetics for Translational Research

›
This month saw the 2010 Infectious Disease Genomics & Global Health meeting at Hinxton, which attracted a good number of people involved...
Saturday, 10 July 2010

What are the conditions for multiple foci of adaptation?

›
Selection on standing variation, soft sweeps, parallel adaptation: these alternatives to the population genetics paradigm of the S-shaped se...
Thursday, 8 July 2010

Discovering the distribution of fitness effects

›
At this year's Society for Molecular Biology and Evolution meeting in Lyon I presented ongoing work estimating the distribution of fitn...
8 comments:
Friday, 30 April 2010

Election to St. John's College

›
I'm pleased to have been elected to membership of the SCR at St. John's College , my alma mater. The college is an important aspect ...
Saturday, 27 February 2010

Postdoc and PhD position available

›
These positions are now closed. Advertised today in Nature and on Thursday in New Scientist are two positions in my lab. I am looking for ...
1 comment:
Sunday, 7 February 2010

Holding early human stone tools

›
Today I had an extraordinary experience, precipitated by my visit to the British Museum on something of a whim. Listening to the Radio 4 ser...
Monday, 16 November 2009

Campylobacter source attribution in New Zealand

›
What is the source of the common food poisoning pathogen Campylobacter jejuni was the subject of a paper published in September last year ...

Selection in a putative meningitis vaccine target

›
In Variation of the factor H-binding protein in Neisseria meningitidis , Carina Brehony in Martin Maiden's lab at Oxford investigated a ...

Recombination and proper segregation in human meiosis

›
My blog entries have lapsed since the summer while I have attempted to press on with various projects to tie up as much as possible by the e...
Thursday, 18 June 2009

SMBE Iowa City

›
I spent the beginning of the month at the SMBE (Society for Molecular Biology and Evolution) conference in Iowa City. It was a good chance ...
Monday, 25 May 2009

Science Bomb!

›
On Friday Chris Spencer gave the PPS ( Pritchard / Przeworski / Stephens ) lab meeting as part of a trip to Chicago. Chris talked about his...
1 comment:
Monday, 11 May 2009

Neolithic origin of Campylobacter jejuni

›
As part of a recent trip to the University of Edinburgh to visit Andrew Rambaut , I gave a talk on some work of mine published in the Februa...
‹
›
Home
View web version

About me

My photo
Daniel Wilson
University of Oxford
Professor of Infectious Disease Genomics and educator in Data Science at the University of Oxford.
View my complete profile
Powered by Blogger.